Table of contents

• Starting a session
• Adding genes
• Adding strains
• Creating genotypes
• Creating metagenotypes (multi-species genotypes)
• Annotating genes
  • Gene Ontology annotations
  • Protein modification
  • Physical interaction
  • RNA level
  • Protein level
• Annotating genotypes
  • Pathogen phenotype
  • Host phenotype
  • The phenotype curation process
• Annotating metagenotypes
  • Pathogen-host interaction phenotype
  • The phenotype curation process
  • Gene-for-gene phenotype
  • Disease name
• Experimental evidence
• Experimental conditions
• Annotation extensions
• Finishing a session